Books | Journals | Databases | Audiovisuals | Other Resources

Books

Recombinant DNA principles and methodologies

Molecular cloning: a laboratory manual  

The Nucleic acid protocols handbook   

Eukaryotic transcription factors  

Molecular cell biology 

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Journals

Cell 

Molecular Cell  

Genome Research

Embo Journal

Nature Cell Biology

Journal Of Cell And Molecular Biology

Nature Reviews Molecular Cell Biology  

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Databases

PubMed [electronic resource]

National Center for Biotechnology Information NCBI  [electronic resource]

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Audiovisuals

Video guide to DNA biotechnology [videorecording]
 
Molecular cloning of DNA [videorecording] 

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Introduction: DNA, RNA, Restriction Enzymes 

FLI Jena Biocomputing Group: The RNA World Website

Restriction Maps

REBASE

RNABase: The RNA Structure Database

rna interference rnai database

Analysis of RNA: Probe design, labeling, hybridization

GeneFisher - Interactive PCR Primer Design

Analysis of RNA: RT-PCR, Real time PCR

RT-PCR Methodology Animation

Real Time PCR Tutorial

Analysis of DNA: DNA sequencing and analysis, bioinformatics

DG-CST Database (Disease Genes Conserved Sequence Tags Database)

Ensembl Genome Browser

KEGG: Kyoto Encyclopedia of Genes and Genomes

NCBI BLAST (Basic Local Alignment Search Tool)

GeneDesign β2.0

Analysis of DNA: Mutagenesis

IMT BIOINFORMATICS - Mutation databases

The Human Gene Mutation Database at the Institute of Medical Genetics in Cardiff

Human Genome Variation Society (formerly the HUGO Mutation Database Initiative)

Transgenic, knockout, siRNA

gene insertion in transgenic animals

Transgenic Animal Web

genome.gov | Knockout Mice

Homolgous Recombination & Knockout Mouse

siRNA selector (Wistar Institute)

SIRNA (EMBOSS)

Analysis of genes: reporter assays, microarrays

L2L Microarray Analysis Tool

ProMAT -- Protein Microarray Analysis Tool

DNA Microarray (Genome Chips) (by Leming Shi, PhD)

DNA Microarray Methodology Animation

NCBI Microarrays Factsheet

Microarrays MediaBook

Analysis of genes: DNA-protein interaction, EMSA, ChIP

Protein-Nucleic Acid Interaction Server

Protein – Protein Interactions

Protein – Protein Interactions Tutorial  

The JCB Protein-Protein Interaction Website

Protein-Protein Interaction Server

The MIPS Mammalian Protein-Protein Interaction Database

DIP:Database of Interacting Proteins

Proteomics

EMBL – EBI   PRIDE (PRoteomics IDEntifications database)

RCSB Protein Data Bank

PIR [Protein Information Resource]

Transcription Factors Binding Site Web Resources

TFSEARCH: Searching Transcription Factor Binding Sites

Over-represented Transcription Factor Binding Site Prediction Tool (OTFBS)

Escherichia coli Transcription Factor Binding Sites

Gene Regulation: Transfac 7.0 - Public

rVista 2.0 :: Identification of Evolutionary Conserved Transition Binding Sites

MatInspector: Search for transcription factor binding sites

Transfac through BIOBASE Biological Databases

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Other Resources

Molecular Biology Resources – Kent State University Library subject guide

TIGR - The Institute for Genomic Research

Biological software - Institut Pasteur

GenePaint

http://biotools.umassmed.edu/ 

HSLS Online Bioinformatics Resources Collection at the University of Pittsburgh

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